hh.sePublications
Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
MvG-NRLMF: Multi-view graph neighborhood regularized logistic matrix factorization for identifying drug–target interaction
Harbin University of Commerce, Harbin, China.
Harbin University of Commerce, Harbin, China.
Halmstad University, School of Information Technology.ORCID iD: 0000-0002-2851-4260
Harbin University of Commerce, Harbin, China.
Show others and affiliations
2024 (English)In: Future Generation Computer Systems, ISSN 0167-739X, E-ISSN 1872-7115, Vol. 160, p. 844-853Article in journal (Refereed) Published
Abstract [en]

Traditional methods for predicting drug–target interactions (DTIs) have significant room for improvement in terms of time period and monetary overhead. At present, machine learning-based approaches are commonly used in the drug discovery field. In this study, a multi-view graph neighborhood regularized logical matrix factorization (MvG-NRLMF) model was proposed to predict unknown DTIs. Multiple similarity matrices (kernels) were constructed from the space of drugs and targets, the corresponding Laplacian matrices were generated, and these were fused. Finally, the MvG-NRLMF model was adjusted using an alternating gradient ascent procedure for training. On the four benchmark datasets, our method was competitive, and on some datasets, our method even outperformed existing models. © 2024 Elsevier B.V.

Place, publisher, year, edition, pages
Amsterdam: Elsevier, 2024. Vol. 160, p. 844-853
Keywords [en]
Bipartite network, Drug–target interactions, Laplacian matrices, Multi-view
National Category
Computer and Information Sciences
Identifiers
URN: urn:nbn:se:hh:diva-54346DOI: 10.1016/j.future.2024.06.046ISI: 001267607800001Scopus ID: 2-s2.0-85197444645OAI: oai:DiVA.org:hh-54346DiVA, id: diva2:1886517
Note

Funding: The work was supported by the Young Research and Innovation Talent Cultivation Program of Harbin University of Commerce, China (2023-KYYWF-0979); the National Natural Science Foundation of China (62172076, U22A2038); Zhejiang Provincial Natural Science Foundation of China (LY23F020003); the Municipal Government of Quzhou, China (2023D038).

Available from: 2024-08-01 Created: 2024-08-01 Last updated: 2024-09-04Bibliographically approved

Open Access in DiVA

No full text in DiVA

Other links

Publisher's full textScopus

Authority records

Tiwari, Prayag

Search in DiVA

By author/editor
Tiwari, PrayagDing, Yijie
By organisation
School of Information Technology
In the same journal
Future Generation Computer Systems
Computer and Information Sciences

Search outside of DiVA

GoogleGoogle Scholar

doi
urn-nbn

Altmetric score

doi
urn-nbn
Total: 44 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf