Kernel Risk Sensitive Loss-based Echo State Networks for Predicting Therapeutic Peptides with Sparse LearningShow others and affiliations
2022 (English)In: Proceedings - 2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022 / [ed] Adjeroh D.; Long Q.; Shi X.; Guo F.; Hu X.; Aluru S.; Narasimhan G.; Wang J.; Kang M.; Mondal A.M.; Liu J., Piscataway: IEEE, 2022, p. 6-11Conference paper, Published paper (Refereed)
Abstract [en]
The detection of therapeutic peptides is usually a biochemical experimental method, which is time-consuming and labor-intensive. Lots of computational biology methods had been proposed to solve the problem of therapeutic peptide prediction. However, the existing methods did not consider the processing of noisy samples. We propose a kernel risk-sensitive mean p-power error-based echo state network with sparse learning (KRP-ESN-SL). An efficient iterative optimization algorithm is used to train the model. The KRP-ESN-SL has better performance than other methods. © 2022 IEEE.
Place, publisher, year, edition, pages
Piscataway: IEEE, 2022. p. 6-11
Keywords [en]
Biological sequence classification, Kernel risk-sensitive loss, Protein function, Sparse learning, Therapeutic peptides
National Category
Biochemistry and Molecular Biology
Identifiers
URN: urn:nbn:se:hh:diva-50030DOI: 10.1109/BIBM55620.2022.9994902Scopus ID: 2-s2.0-85146650638ISBN: 9781665468190 (print)OAI: oai:DiVA.org:hh-50030DiVA, id: diva2:1741517
Conference
2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022, Las Vegas, NV, USA, Changsha, China, 6-8 December 2022
Note
Funding Agency: National Natural Science Foundation of China
2023-03-062023-03-062023-03-06Bibliographically approved