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Detection of spots in 2-d electrophoresis gels by symmetry features
Högskolan i Halmstad, Sektionen för Informationsvetenskap, Data– och Elektroteknik (IDE), Halmstad Embedded and Intelligent Systems Research (EIS).
Högskolan i Halmstad, Sektionen för Informationsvetenskap, Data– och Elektroteknik (IDE), Halmstad Embedded and Intelligent Systems Research (EIS), Laboratoriet för intelligenta system.ORCID-id: 0000-0002-4929-1262
2005 (engelsk)Inngår i: Pattern recognition and data mining: Third International Conference on Advances in Pattern Recognition, ICAPR 2005, Bath, UK, August 22-25, 2005 : proceedings. Part I / [ed] Sameer Singh, Maneesha Singh, Chid Apte and Petra Perner, Berlin: Springer Berlin/Heidelberg, 2005, s. 436-445Konferansepaper, Publicerat paper (Fagfellevurdert)
Abstract [en]

We have implemented an algorithm for detection and segmentation of protein spots in 2-D gel electrophoresis images using symmetry derivative features computed using low level image processing operations. The implementation was compared with a previously published Watershed segmentation and a commercial software. Our algorithm was found to yield segmentation results that were either better than or comparable to the other solutions while having fewer free parameters and a low computational cost. © Springer-Verlag Berlin Heidelberg 2005.

sted, utgiver, år, opplag, sider
Berlin: Springer Berlin/Heidelberg, 2005. s. 436-445
Serie
Lecture Notes in Computer Science, ISSN 0302-9743 ; 3686
Emneord [en]
Algorithms, Computational methods, Computer software, Electrophoresis, Gels, Image segmentation, Proteins
HSV kategori
Identifikatorer
URN: urn:nbn:se:hh:diva-14928ISI: 000232247900047Scopus ID: 2-s2.0-27244458675ISBN: 978-3-540-28757-5 OAI: oai:DiVA.org:hh-14928DiVA, id: diva2:408396
Konferanse
Third International Conference on Advances in Patten Recognition, ICAPR 2005, Bath, 22 August 2005 through 25 August 2005
Tilgjengelig fra: 2011-04-04 Laget: 2011-04-04 Sist oppdatert: 2018-03-23bibliografisk kontrollert
Inngår i avhandling
1. Segmentation of 2D electrophoresis gel images for protein expression analysis
Åpne denne publikasjonen i ny fane eller vindu >>Segmentation of 2D electrophoresis gel images for protein expression analysis
2005 (engelsk)Licentiatavhandling, med artikler (Annet vitenskapelig)
sted, utgiver, år, opplag, sider
Göteborg: Chalmers University of Technology ; Halmstad : School of Information Science, Computer and Electrical Engineering, 2005. s. 26
Serie
Technical report, ISSN 1403-266X ; R028/2005
Emneord
Two-dimensional gel electrophoresis, Image analysis, Image segmentation, Proteomics, Structure tensors, Spot detection, Spot segmentation
HSV kategori
Identifikatorer
urn:nbn:se:hh:diva-714 (URN)2082/1063 (Lokal ID)2082/1063 (Arkivnummer)2082/1063 (OAI)
Presentation
(engelsk)
Merknad

Contains 2 papers

Tilgjengelig fra: 2007-06-04 Laget: 2007-06-04 Sist oppdatert: 2018-03-23bibliografisk kontrollert

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Persson, MartinBigun, Josef

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